Peer-reviewed Journal Publications

2018

  • Hemmler, A., Lutz, B., Reeps, C., Kalender, G., Gee, M.W.: A methodology for in silico endovascular repair of abdominal aortic aneurysms. Biomechanics and Modeling in Mechanobiology 17 (4), 2018, 1139–1164 mehr… BibTeX
  • Jagschies, L., Hirschvogel, M., Matallo, J., Maier, M., Mild, K., Brunner, H., Hinkel, R., Gee, M.W., Radermacher, P., Wildhirt, S.W., Hafner, S.: Individualized Biventricular Epicardial Augmentation Technology in a Drug-Induced Porcine Failing Heart Model. Journal of American Society for Artificial Internal Organs, 2018 mehr… BibTeX
  • Mayr, M., Wall, W. A., Gee, M. W.: Adaptive time stepping for fluid-structure interaction solvers. Finite Elements in Analysis and Design 141, 2018 mehr… BibTeX
  • Thon, M.P., Ford, H.Z., Gee, M.W., Myerscough, M.R.: A Quantitative Model of Early Atherosclerotic Plaques Parameterized Using In Vitro Experiments. Bulletin of Mathematical Biology, 2018 mehr… BibTeX
  • Thon, M.P., Hemmler, A., Glinzer, A., Mayr, M., Wildgruber, M., Zernecke-Madsen, A., Gee, M.W.: A Multiphysics Approach for Modeling Early Atherosclerosis. Biomechanics and Modeling in Mechanobiology 17, 2018, 617-644 mehr… BibTeX
  • Wiesner, T.A., Popp, A., Gee, M.W., Wall, W.A.: Algebraic multigrid methods for dual mortar finite element formulations in contact mechanics. International Journal for Numerical Methods in Engineering 114 (4), 2018 mehr… BibTeX

2017

  • Glinzer, A., Xiaopeng, M., Prakash, J., Kimm, M., Lohöfer, F., Kosanke, K., Pelisek, J., Thon, M., Vorlova, S., Heinze, K., Eckstein, H.-H., Gee, M.W., Ntziachristos V., Zernecke, A., Wildgruber, M.: Targeting elastase for molecular imaging of early atherosclerotic lesions. Ateriosclerosis, Thrombosis and Vascular Biology 37 (2), 2017, 525-533 mehr… BibTeX
  • Hirschvogel, M., Bassilious, M., Jagschies, L., Wildhirt, S.M., Gee, M.W.: A monolithic 3D-0D coupled closed-loop model of the heart and the vascular system: Experiment-based parameter estimation for patient-specific cardiac mechanics. International Journal for Numerical Methods in Biomedical Engineering 33 (8), 2017 mehr… BibTeX
  • Kehl, S.; Gee, M.W.: Calibration of parameters for cardiovascular models with application to arterial growth. International Journal for Numerical Methods in Biomedical Engineering 33 (5), 2017 mehr… BibTeX

2016

  • Biehler, J.; Kehl, S.; Gee, M.W.; Schmies, F.; Pelisek, J.; Maier, A.; Reeps, C.; Eckstein, H.-H.; Wall, W.A.;: Probabilistic noninvasive prediction of wall properties of abdominal aortic aneurysm using Bayesian regression. Biomechanics and Modeling in Mechanobiology 16 (1), 2016, 45-61 mehr… BibTeX

2015

  • Biehler, J.; Gee, M.W.; Wall, W.A.: Towards Efficient Uncertainty Quantification in Complex and Large Scale Biomechanical Problems based on a Bayesian Multi Fidelity Scheme. Biomechanics and Modeling in Mechanobiology 14 (3), 2015, 489-513 mehr… BibTeX
  • Heyden, S., Nagler, A., Bertoglio, C., Biehler, J., Gee, M.W, Wall, W.A., Ortiz, M.: Material modeling of cardiac valve tissue: Experiments, constitutive analysis and numerical investigation. Journal of Biomechanics 48 (16), 2015, 4287–4296 mehr… BibTeX
  • Mayr, M.; Klöppel, T.; Wall, W. A.; Gee, M. W.: A Temporal Consistent Monolithic Approach to Fluid-Structure Interaction Enabling Single Field Predictors. SIAM Journal on Scientific Computing 37 (1), 2015, B30-B59 mehr… BibTeX
  • Tanios, F.; Gee, M.W.; Pelisek, J.; Kehl, S.; Biehler, J.; Grabher-Meier, V.; Wall, W.A.; Eckstein, H.-H.; Reeps, C.;: Interaction of Biomechanics with Extracellular Matrix Components in Abdominal Aortic Aneurysm Wall. European Journal of Vascular and Endovascular Surgery 50 (2), 2015, 167–174 mehr… BibTeX
  • de Vaal, H., Gee, M.W., Stock, U., Wall, W.A.: Computational Evaluation of Aortic Occlusion and the Proposal of a Novel, Improved Occluder: Constrained Endo-Aortic Balloon Occlusion (CEABO). International Journal for Numerical Methods in Biomedical Engineering, 2015 mehr… BibTeX

2014

  • Bel-Brunon, A.; Kehl, S.; Martin, C.; Uhlig, S.; Wall, W.A.: Numerical identification method for the non-linear viscoelastic compressible behaviour of soft tissue using uniaxial tensile tests and image registration - Application to rat lung parenchyma. Journal of the Mechanical Behavior of Biomedical Materials 29, 2014, 360-374 mehr… BibTeX
  • Reeps, C.; Kehl, S.; Tanios, F.; Maier, A.; Biehler, J.; Pelisek, J.; Wall, W.A.; Eckstein, H.-H.; Gee, M.: Biomechanics and gene expression in abdominal aortic aneurysm. Journal of Vascular Surgery 60 (6), 2014, 1640-1647 mehr… BibTeX
  • Wiesner, T. A.; Tuminaro, R. S.; Wall, W. A.; Gee, M. W.;: Multigrid transfers for nonsymmetric systems based on Schur complements and Galerkin projections. Numerical Linear Algebra with Applications 21 (3), 2014, 415-438 mehr… BibTeX

2013

  • Ismail, M.; Wall, W.A.; Gee, M.W.: Adjoint-based inverse analysis of windkessel parameters for patient-specific vascular models. Journal of Computational Physics 244, 2013, 113-130 mehr… BibTeX
  • Popp, A.; Seitz, A.; Gee, M.W.; Wall, W.A.: Improved robustness and consistency of 3D contact algorithms based on a dual mortar approach. Computer Methods in Applied Mechanics and Engineering 264 (1), 2013, 67-80 mehr… BibTeX
  • Reeps, C.; Maier, A.; Pelisek, J.; Haertl, F.; Wall, W.A.; Eckstein, H.-H.; Gee, M.W.,: Measuring and Modeling Patient-Specific Distributions of Material Properties in Abdominal Aortic Aneurysm Wall. Biomechanics and Modeling in Mechanobiology 12 (4), 2013, 717-733 mehr… BibTeX

2012

  • Maier, A.; Essler, M.; Gee, M.W.; Eckstein, H.-H.; Wall, W.A.; Reeps, C.: Correlation of biomechanics to tissue reaction in aortic aneurysms assessed by finite elements and [18F]-fluorodeoxyglucose-PET/CT. International Journal for Numerical Methods in Biomedical Engineering 28 (4), 2012, 456-471 mehr… BibTeX
  • Marini, G.; Maier, A.; Reeps, C.; Eckstein, H.H.; Wall, W.A.; Gee, M.: A continuum description of the damage process in the arterial wall of abdominal aortic aneurysms. International Journal for Numerical Methods in Biomedical Engineering 28 (1), 2012, 87-99 mehr… BibTeX
  • Popp, A.; Wohlmuth, B.I.; Gee, M.W.; Wall, W.A.: Dual quadratic mortar finite element methods for 3D finite deformation contact. SIAM Journal on Scientific Computing 34 (4), 2012, B421-B446 mehr… BibTeX
  • Wohlmuth, B.I.; Popp, A.; Gee, M.W.; Wall, W.A: An abstract framework for a priori estimates for contact problems in 3D with quadratic finite elements. Computational Mechanics 49 (6), 2012, 735-747 mehr… BibTeX

2011

  • Gee, M.; Küttler, U.; Wall, W.A: Truly monolithic algebraic multigrid for fluid-structure interaction. International Journal for Numerical Methods in Engineering 85 (8), 2011, 987-1016 mehr… BibTeX
  • Gravemeier, V.; Kronbichler, M.; Gee, M.W.; Wall, W.A.: An algebraic variational multiscale-multigrid method for large-eddy simulation: generalized-alpha time integration, Fourier analysis and application to turbulent flow past a square-section cylinder. Computational Mechanics 47 (2), 2011, 217-233 mehr… BibTeX
  • Klöppel, T.; Gee, M.; Wall, W.A.: A scaled thickness conditioning for solid- and solid-shell discretizations of thin-walled structures. Computer Methods in Applied Mechanics and Engineering 200 (9-12), 2011, 1301-1310 mehr… BibTeX

2010

  • Gee, M.W.; Foerster, Ch.; Wall, W.A.: A computational strategy for prestressing patient-specific biomechanical problems under finite deformation. International Journal for Numerical Methods in Biomedical Engineering 26 (1), 2010, 52-72 mehr… BibTeX
  • Gitterle, M.; Popp, A..; Gee, M.; Wall, W.A.: Finite deformation frictional mortar contact using a semi-smooth Newton method with consistent linearization. International Journal for Numerical Methods in Engineering 84 (5), 2010, 543-571 mehr… BibTeX
  • Gravemeier, V.; Gee, M.W.; Kronbichler, M.; Wall, W.A.: An algebraic variational multiscale-multigrid method for large eddy simulation of turbulent flow. Computer Methods in Applied Mechanics and Engineering 199 (13-16), 2010, 853-864 mehr… BibTeX
  • Küttler, U.; Gee, M.W.; Förster, Ch.; Comerford, A.; Wall, W.A.: Coupling strategies for biomedical fluid-structure interaction problems. International Journal for Numerical Methods in Biomedical Engineering 26 (3-4), 2010, 305-321 mehr… BibTeX
  • Maier, A.; Gee, M.W.; Reeps, C.; Eckstein, H.H.; Wall, W.A.: Impact of calcifications on patient-specific wall stress analyses of abdominal aortic aneurysms. Biomechanics and Modeling in Mechanobiology 9 (5), 2010, 511-521 mehr… BibTeX
  • Maier, A.; Gee, M.W.; Reeps, C.; Pongratz, J.; Eckstein, H.-H.; Wall, W.A.: A comparison of diameter, wall stress and rupture potential index for abdominal aortic aneurysm rupture risk prediction. Annals of Biomedical Engineering 38 (10), 2010, 3124-3134 mehr… BibTeX
  • Popp, A.; Gitterle, M.; Gee, M.; Wall, W.A.: A dual mortar approach for 3D finite deformation contact with consistent linearization. International Journal for Numerical Methods in Engineering 83 (11), 2010, 1428-1465 mehr… BibTeX
  • Reeps, C.; Gee, M.W.; Maier, A.; Gurdan, M.; Wall, W.A.; Eckstein, H.-H.: The impact of model assumptions on results of computational mechanics in abdominal aortic aneurysm. Journal of Vascular Surgery 51, 2010, 679-688 mehr… BibTeX

2009

  • Gee, M.W.; Dohrmann, C.R.; Key, S.W.; Wall, W.A.: A uniform nodal strain tetrahedron with isochoric stabilization. International Journal for Numerical Methods in Engineering 78 (4), 2009, 429-443 mehr… BibTeX
  • Gee, M.W.; Hu, J.J.; Tuminaro, R.S.: A new smoothed aggregation multigrid method for anisotropic problems. Numerical Linear Algebra with Applications 16 (1), 2009, 19-37 mehr… BibTeX
  • Gee, M.W.; Kelley, C.T.; Lehoucq, R.B.: Pseudo-transient continuation for nonlinear transient elasticity. International Journal for Numerical Methods in Engineering 78 (10), 2009, 1209-1219 mehr… BibTeX
  • Gee, M.W.; Reeps, C.; Eckstein, H.H.; Wall, W.A.: Prestressing in finite deformation abdominal aortic aneurysm simulation. Journal of Biomechanics 42 (11), 2009, 1732-1739 mehr… BibTeX
  • Gravemeier, V.; Gee, M.W.; Wall, W.A.: An algebraic variational multiscale-multigrid method based on plain aggregation for convection-diffusion problems. Computer Methods in Applied Mechanics and Engineering 198 (47-48), 2009, 3821-3835 mehr… BibTeX
  • Popp, A.; Gee, M.W.; Wall, W.A.: A finite deformation mortar contact formulation using a primal-dual active set strategy. International Journal for Numerical Methods in Engineering 79 (11), 2009, 1354-1391 mehr… BibTeX
  • Reeps, C.; Gee, M.W.; Maier, A.; Pelisek, J.; Gurdan, M.; Wall, W.A.; Mariss, J.; Eckstein, H.H.; Essler, M.: Glucose metabolism in the vessel wall correlates with mechanical instability and inflammatory changes in a patient with a growing aneurysm of the abdominal aorta. Circulation: Cardiovascular Imaging - Journal of the Amercan Heart Association 2, 2009, 507-509 mehr… BibTeX

2005

  • Gee, M.W.; Ramm, E.; Wall, W.A.: Parallel multilevel solution of nonlinear shell structures. Computer Methods in Applied Mechanics and Engineering 194 (21-24), 2005, 2513-2533 mehr… BibTeX

2001

  • Gee, M.W.; Wall, W.A.; Ramm, E.: Parallel iterative solvers in nonlinear shell analysis. Zeitschrift für Angewandte Mathematik und Mechanik, 2001 mehr… BibTeX

Proceedings

2013

  • Ismail, M.; Gee, M.W.; Wall, W.A.: CFD Challenge: Hemodynamic Simulation of a Patient-Specific Aortic Coarctation Model with Adjoint-Based Calibrated Windkessel Elements. Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges (Lecture Notes in Computer Science 7746), Springer, 2013Third International Workshop, STACOM 2012, Held in Conjunction with MICCAI 2012, 44-52 mehr… BibTeX
  • Nagler, A.; Bertoglio, C.; Gee, M.; Wall W.A.: Personalization of cardiac fiber orientations from image data using the Unscented Kalman Filter. Functional Imaging and Modeling of the Heart (Lecture Notes in Computer Science), Springer, 2013FIMH 2013 (7th International Conference on Functional Imaging and Modeling of the Heart) mehr… BibTeX
  • Popp, A.; Gee, M.W.; Wall, W.A.: Mortar methods for single- and multi-field applications in computational mechanics. Sustained Simulation Performance 2012 (High Performance Computing on Vector Systems), Springer, 2013Proceedings of the joint Workshop on High Performance Computing on Vector Systems, Stuttgart (HLRS), and Workshop on Sustained Simulation Performance, Tohoku University, 2012, 133-154 mehr… BibTeX
  • Popp, A.; Gee, M.W.; Wall, W.A.: A primal-dual active set strategy for finite deformation dual mortar contact. Recent Advances in Contact Mechanics (Lecture Notes in Applied and Computational Mechanics), 2013Papers Collected at the 5th Contact Mechanics International Symposium (CMIS2009), April 28-30, 2009, Chania, Greece, 151-171 mehr… BibTeX
  • Wiesner, T.; Popp, A.; Gee, M.W.; Wall, W.A.: Towards algebraic multigrid (AMG) methods for mortar-based finite element discretizations in contact mechanics. ICCCM2013, 20133rd International Conf. on Computational Contact Mechanics mehr… BibTeX
  • Wiesner, T.A.; Popp, A.; Wall, W.A.; Gee, M.W.: Algebraic multigrid (AMG) methods for saddle-point problems arising from mortar-based finite element discretizations. Enumath 2013, 2013The European Numerical Mathematics and Advanced Applications Conference, Lausanne, Schweiz mehr… BibTeX

2007

  • Wiechert, L.; Rabczuk, T.; Gee, M.; Metzke, R.; Wall, W.A.: Coupled problems in computational modeling of the respiratory system. High Performance Computing on Vector Systems 2007, Springer, 2007This book contains papers presented at the fifth Teraflop Workshop, held in November 2006 at Tohoku University, Japan and the sixth Teraflop Workshop held in March 2007 at the Stuttgart High Performance Computing Center (HLRS) in Germany., 145-166 mehr… BibTeX

Technical Reports

2014

  • Wiesner, T.; Gee, M.W.; Prokopenko, A.; Hu, J.: The MueLu Tutorial – SAND2014-18624R. Sandia National Laboratories, 2014, mehr… BibTeX

2011

  • Danowski, C.; Gravemeier, V.; Kuettler, U.; Gee, M.W.; Wall, W.A.: A Computational Monolithic Approach to Thermo-Structure Interaction in Rocket Nozzles, Sonderforschungsbereich/Transregio 40 – Annual Report 2011. Institute for Aerodynamics, TU Munich, 2011, mehr… BibTeX

2010

  • Mayr, Matthias: Different Sliding Laws on Embedded Interfaces using Lagrange Multipliers, Penalty Method and Nitsche’s Method. 2010 mehr… BibTeX
  • Olson, L.; Badri, H.; Gaidamour, J.; Tuminaro, R.S.; Siefert, C.; Hu, J.J.; Gee, M.W.; Waisman, H.; Gerstenberger, A.; Wiesner, T.; Schroder, J.; Keyes, D.: A flexible AMG framework centered on energy minimization – SAND2010-8446C. Sandia National Laboratories, 2010, mehr… BibTeX

2008

  • Gee, M.W.; Lehoucq, R.; Kelley, C.T.: Pseudo Transient Continuation for Nonlinear Transient Elasticity – SAND2008-0627J. Sandia National Laboratories, 2008, mehr… BibTeX

2006

  • Gee, M.W.; Siefert, C.M.; Hu, J.J.; Tuminaro, R.S.; Sala, M.G.: ML 5.0 Smoothed Aggregation User's Guide – SAND2006-2649. Sandia National Laboratories, 2006, mehr… BibTeX
  • Gee, M.W.; Tuminaro, R.S.: Nonlinear Algebraic Multigrid for Constrained Solid Mechanics using Trilinos – SAND2006-2256. Sandia National Laboratories, 2006, mehr… BibTeX

Book Contributions

2010

  • Comerford, A.; Rausch, S.; Wiechert, L.; Gee, M.W.; Wall, W.A.: Computational Modelling of the Respiratory System for Improvement of Mechanical Ventilation Strategies. High Performance Computing in Science and Engineering Part 2, 2010, 267-277 mehr… BibTeX
  • Wall, W.A.; Küttler, U.; Gerstenberger, A.; Gee, M.; Förster, Ch.: Advances in computational fluid-thin-walled-structure interaction - formulations and solvers. New Trends in Thin Structures - Formulation, Optimization and Coupled Problems, Series: CISM International Centre for Mechanical Sciences 519, 2010, 175-203 mehr… BibTeX

2009

  • Küttler, U.; Gee, M.; Wall, W.A.: Algebraic multigrid for monolithic fluid-structure interaction. Sonderforschungsbereich Transregio 40 Jahresbericht 2009-Annual Report, 2009, 267-284 mehr… BibTeX

2004

  • Ramm, E.; Gee, M.; Wall, W.A.: A Multilevel Approach to the Solution of large-scale Nonlinear Shell Problems. Finite Element Methods: 1970's and beyond, 2004 mehr… BibTeX

Posters

2016

  • Glinzer, A.; Thon, M.P.; Wildgruber, M.; Zernecke, A.; Gee, M.W.: A Multiscale Model of Atherosclerosis. 2016 mehr…

2015

  • Glinzer, A.; Thon, M.P.; Wildgruber, M.; Zernecke, A.; Gee, M.W.: A Multiscale Model of Atherosclerosis. 2015 mehr…
  • Mayr, M.; Gee, M.W.: Efficiency of monolithic solvers for incompressible fluid-structure interaction problems. 2015 mehr…

2014

  • Glinzer, A.; Thon, M.P.; Wildgruber, M.; Eckstein H.H.; Gee, M.W.; Zernecke, A.: Establishment of a 3D-Model of the murine aortic arch. 2014 mehr…
  • Glinzer, A.; Thon, M.P.; Wildgruber, M.; Zernecke, A.; Gee, M.W.: A Multiscale Model of Atherosclerosis. 2014 mehr…
  • Hirschvogel, M.; Gee, M. W.: Monolithic 0D windkessel 3D structure coupling with applications in cardiac mechanics. 2014 mehr…

2013

  • Kehl, S.; Wall W.A.; Gee, M.W.: Detecting growth of abdominal aortic aneurysms using variational image registration techniques. 2013 mehr…
  • Mayr, M.; Klöppel, T.; Wall, W. A.; Gee, M. W.: A temporal consistent monolithic approach to fluid-structure interaction enabling single field predictors. 2013 mehr…